E. caballus Gene: SLC11A2 - ENSECAG00000020056 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020056
NameSLC11A2
Descriptionsolute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 [Source:HGNC Symbol;Acc:HGNC:10908]
OrganismEquus caballus (horse)
Synonym(s)dct1, dmt1, nramp2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.55e3
  • 2.55e3
88.93334
  • 88.93334
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.72e3
  • 3.72e3
83.85375
  • 83.85375
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
82.76042
  • 82.76042
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.60e3
  • 4.60e3
80.04459
  • 80.04459
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.76e3
  • 4.76e3
79.35985
  • 79.35985
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.19e3
  • 5.19e3
77.50705
  • 77.50705
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 6.04e3
75.91217
  • 75.91217
  • 73.79655
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.70e3
  • 5.70e3
75.29583
  • 75.29583
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.72e3
  • 5.72e3
  • 8.69e3
75.18845
  • 75.18845
  • 62.29453
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.44e3
  • 6.44e3
  • 7.35e3
72.06055
  • 72.06055
  • 68.11281
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.51e3
  • 6.51e3
71.75764
  • 71.75764
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.62e3
  • 6.62e3
71.29149
  • 71.29149
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.79e3
  • 6.79e3
70.55740
  • 70.55740
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
6.93e3
  • 6.93e3
  • 8.51e3
  • 8.66e3
  • 8.81e3
69.95303
  • 69.95303
  • 63.08279
  • 62.44542
  • 61.80032
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
69.22084
  • 69.22084
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
68.40443
  • 68.40443
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.85e3
  • 7.85e3
65.97120
  • 65.97120
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.13e3
  • 8.13e3
  • 8.35e3
64.75691
  • 64.75691
  • 63.77937
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.62e3
  • 8.62e3
62.64007
  • 62.64007
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.36e3
  • 9.36e3
59.41423
  • 59.41423
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.05e4
56.20705
  • 56.20705
  • 54.35339
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.79932
  • 53.79932
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020056 (SLC11A2)
HGNCHGNC:10908 (SLC11A2)
Uniprot/SPTREMBLF6TK40, F6TK40_HORSE

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