E. caballus Gene: SDF2 - ENSECAG00000020083 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020083
NameSDF2
Descriptionstromal cell-derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.49e3
  • 1.49e3
  • 3.93e3
  • 4.32e3
  • 4.40e3
93.52821
  • 93.52821
  • 82.94032
  • 81.28117
  • 80.94089
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.56e3
  • 1.56e3
93.24218
  • 93.24218
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
91.20948
  • 91.20948
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
90.91452
  • 90.91452
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
2.11e3
  • 2.11e3
90.84712
  • 90.84712
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.23e3
  • 2.23e3
90.31778
  • 90.31778
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.24e3
  • 2.24e3
90.28083
  • 90.28083
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.39e3
  • 2.39e3
  • 2.53e3
89.65763
  • 89.65763
  • 89.03990
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
3.05e3
  • 3.05e3
86.75509
  • 86.75509
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.07e3
  • 3.07e3
86.66995
  • 86.66995
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.69e3
  • 3.69e3
83.98378
  • 83.98378
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.76e3
  • 3.76e3
83.71709
  • 83.71709
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.85e3
  • 3.85e3
83.29969
  • 83.29969
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
  • 4.21e3
82.76380
  • 82.76380
  • 81.74949
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
4.20e3
  • 4.20e3
81.78783
  • 81.78783
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.55e3
  • 4.55e3
80.25350
  • 80.25350
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.63e3
  • 4.63e3
  • 4.89e3
79.91903
  • 79.91903
  • 78.77868
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.92e3
  • 4.92e3
78.66362
  • 78.66362
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.93e3
  • 4.93e3
  • 5.87e3
78.61808
  • 78.61808
  • 74.56738
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.96e3
  • 4.96e3
  • 5.02e3
78.50488
  • 78.50488
  • 78.24960
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.12e3
  • 5.12e3
77.78792
  • 77.78792
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
7.84e3
  • 7.84e3
66.01453
  • 66.01453
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020083 (SDF2)
HGNCHGNC:10675 (SDF2)
Uniprot/SPTREMBLF7CFK9, F7CFK9_HORSE

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