E. caballus Gene: SGCB - ENSECAG00000020148 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020148
NameSGCB
Descriptionsarcoglycan beta [Source:HGNC Symbol;Acc:HGNC:10806]
OrganismEquus caballus (horse)
Synonym(s)a3b, lgmd2e, sgc

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.60e3
  • 1.60e3
  • 2.14e3
93.05773
  • 93.05773
  • 90.71258
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
  • 2.46e3
91.89400
  • 91.89400
  • 89.33365
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.26e3
  • 3.26e3
85.86941
  • 85.86941
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.48e3
  • 3.48e3
84.89062
  • 84.89062
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.59e3
  • 3.59e3
  • 5.06e3
84.45335
  • 84.45335
  • 78.07174
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.62e3
  • 3.62e3
84.29817
  • 84.29817
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.18e3
  • 4.18e3
81.87700
  • 81.87700
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.44e3
  • 4.44e3
80.72772
  • 80.72772
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
78.72950
  • 78.72950
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.03e3
  • 5.03e3
78.20193
  • 78.20193
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.25e3
  • 5.25e3
  • 7.83e3
77.24184
  • 77.24184
  • 66.04779
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.30e3
  • 5.30e3
77.01995
  • 77.01995
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.98e3
  • 6.98e3
  • 7.03e3
  • 7.70e3
  • 8.65e3
69.73153
  • 69.73153
  • 69.53190
  • 66.61196
  • 62.49928
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
68.38526
  • 68.38526
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.55e3
  • 8.55e3
62.91248
  • 62.91248
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.73e3
  • 8.73e3
62.14967
  • 62.14967
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
59.54864
  • 59.54864
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.45e3
  • 9.45e3
59.01384
  • 59.01384
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.96e3
  • 9.96e3
56.79720
  • 56.79720
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.10e4
56.23151
  • 56.23151
  • 52.24045
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.48202
  • 50.48202
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
50.01600
  • 50.01600
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020148 (SGCB)
HGNCHGNC:10806 (SGCB)
Uniprot/SPTREMBLF7E0D5, F7E0D5_HORSE

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