E. caballus Gene: PRKDC - ENSECAG00000020168 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020168
NamePRKDC
Descriptionprotein kinase, DNA-activated, catalytic polypeptide [Source:HGNC Symbol;Acc:HGNC:9413]
OrganismEquus caballus (horse)
Synonym(s)dna-pkcs, dnapk, dnpk1, hyrc, hyrc1, p350, xrcc7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
80.32190
  • 80.32190
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.23e3
  • 5.23e3
  • 5.36e3
77.32884
  • 77.32884
  • 76.74893
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.32e3
  • 5.32e3
76.94596
  • 76.94596
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.34e3
  • 5.34e3
76.84235
  • 76.84235
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
5.79e3
  • 5.79e3
74.90909
  • 74.90909
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.67e3
  • 8.67e3
  • 9.20e3
62.38249
  • 62.38249
  • 60.08748
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.10e3
  • 9.10e3
  • 9.48e3
60.55584
  • 60.55584
  • 58.87180
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.35e3
  • 9.35e3
59.46914
  • 59.46914
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
9.43e3
  • 9.43e3
59.11428
  • 59.11428
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
  • 9.82e3
58.00659
  • 58.00659
  • 57.40326
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
57.74576
  • 57.74576
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.75e3
  • 9.75e3
57.71041
  • 57.71041
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.06e4
  • 1.14e4
  • 1.38e4
55.84048
  • 55.84048
  • 54.23516
  • 50.43171
  • 40.16134
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.05e4
55.15028
  • 55.15028
  • 54.31197
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
54.85384
  • 54.85384
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.26868
  • 54.26868
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.48775
  • 53.48775
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.26213
  • 52.26213
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.11029
  • 52.11029
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
51.21460
  • 51.21460
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.56516
  • 50.56516
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
49.94310
  • 49.94310
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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