Gene: IFT27 - ENSECAG00000020212 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000020212
Name	IFT27
Description	intraflagellar transport 27 [Source:HGNC Symbol;Acc:HGNC:18626]
Organism	Equus caballus (horse)
Synonym(s)	bbs19, rabl4, rayl

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle UBERON:0000112sexually immature stage	1.51e3 1.51e3 1.58e3 2.18e3 4.07e3	93.47539 93.47539 93.14776 90.55384 82.36314	AEIR AEIR AEIR AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	2.20e3 2.20e3	90.46732 90.46732	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	3.29e3 3.29e3	85.73101 85.73101	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	3.40e3 3.40e3 3.93e3	85.25190 85.25190 82.95667	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	3.65e3 3.65e3 4.15e3	84.18407 84.18407 82.00546	AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	4.05e3 4.05e3	82.44954 82.44954	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	4.21e3 4.21e3	81.72824 81.72824	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage UBERON:0000068embryo stage	4.44e3 4.44e3	80.74359 80.74359	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.58e3 4.58e3	80.14204 80.14204	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	4.96e3 4.96e3	78.48562 78.48562	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	5.01e3 5.01e3	78.29644 78.29644	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	6.49e3 6.49e3	71.83732 71.83732	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	7.41e3 7.41e3 8.73e3	67.85805 67.85805 62.15661	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	8.19e3 8.19e3	64.50293 64.50293	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	8.68e3 8.68e3 9.43e3	62.35078 62.35078 59.12018	AEIR AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	8.76e3 8.76e3	62.00503 62.00503	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	8.83e3 8.83e3	61.71475 61.71475	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	8.93e3 8.93e3	61.25723 61.25723	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.51e3 9.51e3	58.75600 58.75600	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	1.08e4 1.08e4	53.34966 53.34966	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	1.10e4 1.10e4 1.12e4	52.48445 52.48445 51.40304	AEIR AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	1.24e4 1.24e4	46.18710 46.18710	AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	1.27e4 1.27e4	45.09611 45.09611	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000020212 (IFT27)
HGNC	HGNC:18626 (IFT27)
Uniprot/SPTREMBL	F7BTA0, F7BTA0_HORSE