E. caballus Gene: TUBB - ENSECAG00000020234 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020234
NameTUBB
Descriptiontubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
OrganismEquus caballus (horse)
Synonym(s)m40, mgc16435, ok/sw-cl.56, tubb2a, tubb5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
21.5
  • 21.5
99.91113
  • 99.91113
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
165
  • 165
99.28759
  • 99.28759
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
186
  • 186
99.19916
  • 99.19916
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
187
  • 187
99.19153
  • 99.19153
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
228
  • 228
99.01349
  • 99.01349
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
340
  • 340
98.52960
  • 98.52960
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
446
  • 446
  • 548
98.07217
  • 98.07217
  • 97.62697
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
474
  • 474
  • 932
97.94848
  • 97.94848
  • 95.96366
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
508
  • 508
97.80114
  • 97.80114
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
515
  • 515
97.77092
  • 97.77092
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
519
  • 519
97.75136
  • 97.75136
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
534
  • 534
  • 1.00e3
  • 1.20e3
  • 2.71e3
97.68712
  • 97.68712
  • 95.65433
  • 94.79551
  • 88.25775
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
652
  • 652
97.17457
  • 97.17457
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
667
  • 667
97.11224
  • 97.11224
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
855
  • 855
96.29631
  • 96.29631
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
856
  • 856
  • 941
96.29180
  • 96.29180
  • 95.92401
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
937
  • 937
95.94067
  • 95.94067
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.05e3
  • 1.05e3
95.44858
  • 95.44858
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
94.68725
  • 94.68725
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
94.59648
  • 94.59648
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.31e3
  • 1.31e3
  • 1.37e3
94.31305
  • 94.31305
  • 94.06688
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.40e3
  • 1.40e3
  • 1.51e3
93.91486
  • 93.91486
  • 93.45331
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
92.45357
  • 92.45357
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020234 (TUBB)
HGNCHGNC:20778 (TUBB)
Uniprot/SPTREMBLF7E0H3, F7E0H3_HORSE

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