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E. caballus Gene: SEPT4 - ENSECAG00000020248 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020248
NameSEPT4
Descriptionseptin 4 [Source:HGNC Symbol;Acc:HGNC:9165]
OrganismEquus caballus (horse)
Synonym(s)arts, ce5b3, h5, hcdcrel-2, hucep-7, mart, pnutl2
Orthologs(s)23 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
216
  • 216
  • 303
99.07
  • 99.07
  • 98.69
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
407
  • 407
98.24
  • 98.24
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
427
  • 427
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
471
  • 471
  • 573
97.96
  • 97.96
  • 97.52
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
  • 2.07e3
  • 2.78e3
  • 3.04e3
95.20
  • 95.20
  • 91.01
  • 87.96
  • 86.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.23e3
  • 5.23e3
  • 6.03e3
77.34
  • 77.34
  • 73.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.23e3
  • 5.23e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.43e3
  • 5.43e3
  • 5.43e3
76.45
  • 76.45
  • 76.45
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.78e3
  • 5.78e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
6.88e3
  • 6.88e3
70.18
  • 70.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
7.24e3
  • 7.24e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.45e3
  • 7.45e3
67.71
  • 67.71
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.52e3
  • 9.52e3
58.75
  • 58.75
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.00e4
  • 1.00e4
56.63
  • 56.63
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.79
  • 53.79
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.37
  • 50.37
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
  • 1.20e4
49.67
  • 49.67
  • 47.82
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
48.05
  • 48.05
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
44.37
  • 44.37
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.83
  • 42.83
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
41.11
  • 41.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSECAG00000020248.

Paralogs (same species)

Paralogy information comes from OMA : ENSECAG00000020248.

Cross-references

EnsemblENSECAG00000020248 (SEPT4)
HGNCHGNC:9165 (SEPT4)
Uniprot/SPTREMBLF6UN58, F6UN58_HORSE

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