Gene: RAB3D - ENSECAG00000020419 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000020419
Name	RAB3D
Description	RAB3D, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9779]
Organism	Equus caballus (horse)
Synonym(s)	d2-2, gov, rab16, rad3d

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	996 996	95.68261 95.68261	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage UBERON:0000068embryo stage	2.02e3 2.02e3	91.26474 91.26474	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	2.33e3 2.33e3	89.89643 89.89643	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	2.83e3 2.83e3	87.72763 87.72763	AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	2.88e3 2.88e3	87.52075 87.52075	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	4.03e3 4.03e3	82.50904 82.50904	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.59e3 4.59e3	80.10413 80.10413	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	4.90e3 4.90e3 6.65e3	78.76680 78.76680 71.16147	AEIR AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.26e3 6.26e3	72.87457 72.87457	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	6.78e3 6.78e3	70.58477 70.58477	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	6.98e3 6.98e3 7.31e3	69.74511 69.74511 68.30143	AEIR AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	8.34e3 8.34e3 8.59e3	63.81277 63.81277 62.75318	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	8.66e3 8.66e3 9.02e3	62.44910 62.44910 60.89257	AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	8.87e3 8.87e3	61.53836 61.53836	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	9.07e3 9.07e3	60.68647 60.68647	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	9.07e3 9.07e3 1.13e4 1.30e4 1.36e4	60.65898 60.65898 50.96422 43.44949 40.98105	AEIR AEIR AEIR AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	9.20e3 9.20e3	60.10691 60.10691	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	9.32e3 9.32e3 9.62e3	59.57904 59.57904 58.27723	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	9.61e3 9.61e3	58.33213 58.33213	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	1.04e4 1.04e4	55.06540 55.06540	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	1.05e4 1.05e4	54.61717 54.61717	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	1.13e4 1.13e4	50.78943 50.78943	AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	1.18e4 1.18e4	48.86958 48.86958	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000020419 (RAB3D)
HGNC	HGNC:9779 (RAB3D)
Uniprot/SPTREMBL	F7DZ70, F7DZ70_HORSE