E. caballus Gene: TMEM39A - ENSECAG00000020653 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020653
NameTMEM39A
Descriptiontransmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]
OrganismEquus caballus (horse)
Synonym(s)flj10902

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.46e3
  • 2.46e3
89.34
  • 89.34
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.74e3
  • 2.74e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.88e3
  • 2.88e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.37e3
  • 4.37e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
5.15e3
  • 5.15e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.41e3
  • 5.41e3
  • 7.55e3
  • 7.88e3
  • 8.14e3
76.54
  • 76.54
  • 67.24
  • 65.84
  • 64.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.50e3
  • 5.50e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.92e3
  • 5.92e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.22e3
  • 7.22e3
  • 7.46e3
68.68
  • 68.68
  • 67.67
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.25e3
  • 7.25e3
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
67.77
  • 67.77
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.30e3
  • 8.30e3
  • 8.74e3
64.01
  • 64.01
  • 62.09
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.08e3
  • 9.08e3
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.16e3
  • 9.16e3
60.26
  • 60.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
58.69
  • 58.69
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
  • 9.85e3
58.19
  • 58.19
  • 57.29
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
  • 1.08e4
57.78
  • 57.78
  • 53.07
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.12e4
51.67
  • 51.67
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
49.56
  • 49.56
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.24
  • 47.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020653 (TMEM39A)
HGNCHGNC:25600 (TMEM39A)
Uniprot/SPTREMBLF6T4N0, F6T4N0_HORSE

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