E. caballus Gene: NPHP1 - ENSECAG00000020702 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020702
NameNPHP1
Descriptionnephronophthisis 1 (juvenile) [Source:HGNC Symbol;Acc:HGNC:7905]
OrganismEquus caballus (horse)
Synonym(s)jbts4, nph1, slsn1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
5.41e3
  • 5.41e3
76.52192
  • 76.52192
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
6.05e3
  • 6.05e3
  • 6.34e3
  • 6.62e3
  • 1.07e4
73.77404
  • 73.77404
  • 72.50536
  • 71.29722
  • 53.74802
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
67.31374
  • 67.31374
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.50e3
  • 8.50e3
63.13202
  • 63.13202
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.59e3
  • 8.59e3
  • 8.81e3
62.75751
  • 62.75751
  • 61.77825
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.80e3
  • 8.80e3
61.84677
  • 61.84677
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.54e3
  • 9.54e3
58.61031
  • 58.61031
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.62e3
  • 9.62e3
58.26114
  • 58.26114
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.78e3
  • 9.78e3
57.58637
  • 57.58637
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.98e3
  • 9.98e3
  • 1.20e4
56.71609
  • 56.71609
  • 47.74433
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.14e4
55.64371
  • 55.64371
  • 50.60632
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.29948
  • 54.29948
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.12e4
53.93156
  • 53.93156
  • 51.55823
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.83931
  • 52.83931
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.19664
  • 50.19664
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.06107
  • 49.06107
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.44598
  • 48.44598
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
48.39077
  • 48.39077
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
47.61079
  • 47.61079
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
45.18263
  • 45.18263
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.27e4
  • 1.27e4
  • 1.28e4
44.74511
  • 44.74511
  • 44.46658
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020702 (NPHP1)
HGNCHGNC:7905 (NPHP1)
Uniprot/SPTREMBLF6TI15, F6TI15_HORSE, F6TR14, F6TR14_HORSE

Do not show this banner again