E. caballus Gene: SNTA1 - ENSECAG00000020715 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020715
NameSNTA1
Descriptionsyntrophin, alpha 1 [Source:HGNC Symbol;Acc:HGNC:11167]
OrganismEquus caballus (horse)
Synonym(s)lqt12, snt1, tacip1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
765
  • 765
  • 770
96.68751
  • 96.68751
  • 96.66578
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
806
  • 806
96.50792
  • 96.50792
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
873
  • 873
  • 1.10e3
96.21664
  • 96.21664
  • 95.24656
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.86e3
  • 2.86e3
  • 5.28e3
  • 5.94e3
  • 7.29e3
87.59852
  • 87.59852
  • 77.08830
  • 74.23776
  • 68.40114
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
86.56261
  • 86.56261
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.50e3
  • 3.50e3
84.83588
  • 84.83588
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.57e3
  • 3.57e3
  • 4.39e3
84.50362
  • 84.50362
  • 80.98191
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.58e3
  • 3.58e3
  • 4.15e3
84.49829
  • 84.49829
  • 81.99406
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.59e3
  • 3.59e3
84.44381
  • 84.44381
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.81e3
  • 3.81e3
83.49989
  • 83.49989
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
4.36e3
  • 4.36e3
81.10938
  • 81.10938
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.92e3
  • 4.92e3
78.67073
  • 78.67073
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
7.12e3
  • 7.12e3
69.13801
  • 69.13801
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.53e3
  • 8.53e3
62.99076
  • 62.99076
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
56.43171
  • 56.43171
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.85536
  • 55.85536
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.05152
  • 53.05152
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
52.05577
  • 52.05577
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.25e4
  • 1.25e4
  • 1.26e4
45.88910
  • 45.88910
  • 45.55155
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.05460
  • 45.05460
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020715 (SNTA1)
HGNCHGNC:11167 (SNTA1)
Uniprot/SPTREMBLF6V2J7, F6V2J7_HORSE

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