Gene: SNTA1 - ENSECAG00000020715 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000020715
Name	SNTA1
Description	syntrophin, alpha 1 [Source:HGNC Symbol;Acc:HGNC:11167]
Organism	Equus caballus (horse)
Synonym(s)	lqt12, snt1, tacip1

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	765 765 770	96.68751 96.68751 96.66578	AEIR AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	806 806	96.50792 96.50792	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	873 873 1.10e3	96.21664 96.21664 95.24656	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle UBERON:0000112sexually immature stage	2.86e3 2.86e3 5.28e3 5.94e3 7.29e3	87.59852 87.59852 77.08830 74.23776 68.40114	AEIR AEIR AEIR AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.10e3 3.10e3	86.56261 86.56261	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	3.50e3 3.50e3	84.83588 84.83588	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	3.57e3 3.57e3 4.39e3	84.50362 84.50362 80.98191	AEIR AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	3.58e3 3.58e3 4.15e3	84.49829 84.49829 81.99406	AEIR AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	3.59e3 3.59e3	84.44381 84.44381	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	3.81e3 3.81e3	83.49989 83.49989	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	4.36e3 4.36e3	81.10938 81.10938	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	4.92e3 4.92e3	78.67073 78.67073	AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	7.12e3 7.12e3	69.13801 69.13801	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	8.53e3 8.53e3	62.99076 62.99076	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.00e4 1.00e4	56.43171 56.43171	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	1.02e4 1.02e4	55.85536 55.85536	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	1.08e4 1.08e4	53.05152 53.05152	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	1.11e4 1.11e4	52.05577 52.05577	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.25e4 1.25e4 1.26e4	45.88910 45.88910 45.55155	AEIR AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	1.27e4 1.27e4	45.05460 45.05460	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000020715 (SNTA1)
HGNC	HGNC:11167 (SNTA1)
Uniprot/SPTREMBL	F6V2J7, F6V2J7_HORSE