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E. caballus Gene: SEPT5 - ENSECAG00000020718 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020718
NameSEPT5
Descriptionseptin 5 [Source:HGNC Symbol;Acc:HGNC:9164]
OrganismEquus caballus (horse)
Synonym(s)h5, hcdcrel-1, pnutl1
Orthologs(s)22 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
186
  • 186
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
935
  • 935
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
944
  • 944
  • 967
95.91
  • 95.91
  • 95.81
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.50e3
  • 1.50e3
93.49
  • 93.49
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.04e3
  • 2.04e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.04e3
  • 3.04e3
86.82
  • 86.82
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.68e3
  • 3.68e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.68e3
  • 3.68e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.74e3
  • 4.74e3
  • 5.14e3
79.46
  • 79.46
  • 77.71
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.67e3
  • 5.67e3
  • 8.00e3
75.44
  • 75.44
  • 65.34
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
5.84e3
  • 5.84e3
74.70
  • 74.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
  • 8.97e3
  • 1.13e4
  • 1.15e4
70.63
  • 70.63
  • 61.10
  • 50.88
  • 50.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
  • 8.28e3
65.03
  • 65.03
  • 64.10
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.36e3
  • 8.36e3
  • 8.91e3
63.75
  • 63.75
  • 61.39
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
9.15e3
  • 9.15e3
60.31
  • 60.31
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.47e3
  • 9.47e3
58.94
  • 58.94
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
54.86
  • 54.86
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.46
  • 53.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
48.69
  • 48.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
40.03
  • 40.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSECAG00000020718.

Paralogs (same species)

Paralogy information comes from OMA : ENSECAG00000020718.

Cross-references

EnsemblENSECAG00000020718 (SEPT5)
HGNCHGNC:9164 (SEPT5)
Uniprot/SPTREMBLH9H005, H9H005_HORSE

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