E. caballus Gene: COL10A1 - ENSECAG00000020826 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020826
NameCOL10A1
Descriptioncollagen, type X, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2185]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
662
  • 662
97.13306
  • 97.13306
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.55e4
  • 1.55e4
32.88988
  • 32.88988
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
30.49365
  • 30.49365
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.28430
  • 30.28430
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
26.06024
  • 26.06024
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020826 (COL10A1)
HGNCHGNC:2185 (COL10A1)
Uniprot/SPTREMBLF6WCC9, F6WCC9_HORSE

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