E. caballus Gene: LSMEM1 - ENSECAG00000020860 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020860
NameLSMEM1
Descriptionleucine-rich single-pass membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:22036]
OrganismEquus caballus (horse)
Synonym(s)c7orf53, flj39575

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.73e3
  • 1.73e3
  • 2.86e3
92.50553
  • 92.50553
  • 87.57909
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.00e3
  • 3.00e3
  • 3.60e3
86.97211
  • 86.97211
  • 84.39303
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
86.82543
  • 86.82543
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
8.77e3
  • 8.77e3
61.98547
  • 61.98547
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
8.97e3
  • 8.97e3
61.09919
  • 61.09919
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
  • 1.59e4
49.87756
  • 49.87756
  • 31.24127
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.64432
  • 45.64432
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.32871
  • 38.32871
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
37.84391
  • 37.84391
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.60407
  • 37.60407
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.76198
  • 36.76198
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.46e4
  • 1.46e4
  • 1.51e4
  • 1.68e4
36.64007
  • 36.64007
  • 34.38869
  • 27.23255
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
1.47e4
  • 1.47e4
36.25992
  • 36.25992
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
31.05525
  • 31.05525
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
28.06627
  • 28.06627
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020860 (LSMEM1)
HGNCHGNC:22036 (LSMEM1)
Uniprot/SPTREMBLF6WCD5, F6WCD5_HORSE

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