E. caballus Gene: SH3TC1 - ENSECAG00000020879 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020879
NameSH3TC1
DescriptionSH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
OrganismEquus caballus (horse)
Synonym(s)flj20356

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.43e3
  • 6.43e3
  • 6.61e3
72.13393
  • 72.13393
  • 71.34766
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.35e3
  • 7.35e3
68.14703
  • 68.14703
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.76e3
  • 7.76e3
66.36379
  • 66.36379
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.98e3
  • 7.98e3
65.41571
  • 65.41571
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.25e3
  • 9.25e3
59.87605
  • 59.87605
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.65091
  • 55.65091
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
55.08197
  • 55.08197
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
53.04112
  • 53.04112
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.32e4
  • 1.47e4
  • 1.56e4
52.33009
  • 52.33009
  • 42.75396
  • 36.23837
  • 32.36761
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.30e4
47.40417
  • 47.40417
  • 43.78280
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
46.98833
  • 46.98833
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
  • 1.25e4
46.62285
  • 46.62285
  • 45.94973
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.13480
  • 46.13480
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.29930
  • 45.29930
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
44.05001
  • 44.05001
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.24895
  • 41.24895
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.42e4
  • 1.42e4
  • 1.56e4
38.42729
  • 38.42729
  • 32.18090
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.89170
  • 35.89170
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.52e4
  • 1.52e4
34.09442
  • 34.09442
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020879 (SH3TC1)
HGNCHGNC:26009 (SH3TC1)
Uniprot/SPTREMBLF6VPF5, F6VPF5_HORSE

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