Gene: CSDE1 - ENSECAG00000020885 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000020885
Name	CSDE1
Description	cold shock domain containing E1, RNA binding [Source:HGNC Symbol;Acc:HGNC:29905]
Organism	Equus caballus (horse)
Synonym(s)	d1s155e, unr

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	163 163 218	99.30 99.30 99.06	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0007222late adult stage UBERON:0018241prime adult stage	185 185 235	99.20 99.20 98.98	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage UBERON:0000068embryo stage	256 256	98.89 98.89	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	291 291 317 390 442	98.74 98.74 98.63 98.31 98.09	AEIR AEIR AEIR AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	296 296	98.72 98.72	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	313 313	98.65 98.65	AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	342 342	98.52 98.52	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	345 345 384	98.51 98.51 98.34	AEIR AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	423 423	98.17 98.17	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	423 423 526	98.17 98.17 97.72	AEIR AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	441 441	98.09 98.09	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	469 469	97.97 97.97	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	476 476	97.94 97.94	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	486 486	97.90 97.90	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	512 512	97.79 97.79	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	581 581 1.56e3	97.49 97.49 93.23	AEIR AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	588 588	97.46 97.46	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	588 588	97.45 97.45	AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	592 592	97.44 97.44	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	617 617	97.33 97.33	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	684 684	97.04 97.04	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	694 694	97.00 97.00	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	1.14e3 1.14e3	95.06 95.06	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000020885 (CSDE1)
HGNC	HGNC:29905 (CSDE1)
Uniprot/SPTREMBL	F6QY89, F6QY89_HORSE, F6WG01, F6WG01_HORSE