E. caballus Gene: TMCO4 - ENSECAG00000020925 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020925
NameTMCO4
Descriptiontransmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
OrganismEquus caballus (horse)
Synonym(s)dkfzp686c23231

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
83.64692
  • 83.64692
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
5.65e3
  • 5.65e3
75.50054
  • 75.50054
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
74.13714
  • 74.13714
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
  • 7.18e3
71.94791
  • 71.94791
  • 68.85588
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.67e3
  • 6.67e3
71.08540
  • 71.08540
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
6.89e3
  • 6.89e3
70.11619
  • 70.11619
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
7.01e3
  • 7.01e3
69.59158
  • 69.59158
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.25e3
  • 7.25e3
68.56894
  • 68.56894
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.54e3
  • 7.54e3
  • 7.93e3
  • 8.72e3
  • 9.80e3
67.31622
  • 67.31622
  • 65.60788
  • 62.17053
  • 57.48363
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.83e3
  • 7.83e3
66.02676
  • 66.02676
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
65.86160
  • 65.86160
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.06e3
  • 8.06e3
  • 8.99e3
65.05820
  • 65.05820
  • 61.01110
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.26e3
  • 8.26e3
64.18506
  • 64.18506
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.57e3
  • 8.57e3
  • 1.09e4
62.82816
  • 62.82816
  • 52.53546
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.12e3
  • 9.12e3
  • 9.87e3
60.45457
  • 60.45457
  • 57.21039
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.31e3
  • 9.31e3
59.64223
  • 59.64223
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
9.66e3
  • 9.66e3
58.12161
  • 58.12161
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.76e3
  • 9.76e3
  • 1.06e4
57.68747
  • 57.68747
  • 53.87648
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.44997
  • 47.44997
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.26e4
  • 1.26e4
45.47495
  • 45.47495
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020925 (TMCO4)
HGNCHGNC:27393 (TMCO4)
Uniprot/SPTREMBLF6TRT0, F6TRT0_HORSE

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