Gene: TMCO4 - ENSECAG00000020925 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000020925
Name	TMCO4
Description	transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
Organism	Equus caballus (horse)
Synonym(s)	dkfzp686c23231

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	3.77e3 3.77e3	83.64692 83.64692	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	5.65e3 5.65e3	75.50054 75.50054	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	5.96e3 5.96e3	74.13714 74.13714	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	6.47e3 6.47e3 7.18e3	71.94791 71.94791 68.85588	AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	6.67e3 6.67e3	71.08540 71.08540	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	6.89e3 6.89e3	70.11619 70.11619	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.01e3 7.01e3	69.59158 69.59158	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	7.25e3 7.25e3	68.56894 68.56894	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.54e3 7.54e3 7.93e3 8.72e3 9.80e3	67.31622 67.31622 65.60788 62.17053 57.48363	AEIR AEIR AEIR AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	7.83e3 7.83e3	66.02676 66.02676	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	7.87e3 7.87e3	65.86160 65.86160	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	8.06e3 8.06e3 8.99e3	65.05820 65.05820 61.01110	AEIR AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.26e3 8.26e3	64.18506 64.18506	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	8.57e3 8.57e3 1.09e4	62.82816 62.82816 52.53546	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	9.12e3 9.12e3 9.87e3	60.45457 60.45457 57.21039	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	9.31e3 9.31e3	59.64223 59.64223	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	9.66e3 9.66e3	58.12161 58.12161	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	9.76e3 9.76e3 1.06e4	57.68747 57.68747 53.87648	AEIR AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	1.21e4 1.21e4	47.44997 47.44997	AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	1.26e4 1.26e4	45.47495 45.47495	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000020925 (TMCO4)
HGNC	HGNC:27393 (TMCO4)
Uniprot/SPTREMBL	F6TRT0, F6TRT0_HORSE