E. caballus Gene: SQSTM1 - ENSECAG00000020929 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020929
NameSQSTM1
Descriptionsequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
OrganismEquus caballus (horse)
Synonym(s)a170, osil, p60, p62, p62b, pdb3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
685
  • 685
96.41041
  • 96.41041
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
813
  • 813
95.73909
  • 95.73909
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
917
  • 917
95.19581
  • 95.19581
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020929 (SQSTM1)
HGNCHGNC:11280 (SQSTM1)
Uniprot/SPTREMBLF6WA05, F6WA05_HORSE

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