E. caballus Gene: BCAT1 - ENSECAG00000020973 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020973
NameBCAT1
Descriptionbranched chain amino-acid transaminase 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:976]
OrganismEquus caballus (horse)
Synonym(s)bct1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.04e3
  • 1.04e3
95.50514
  • 95.50514
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.01e3
  • 2.01e3
91.29969
  • 91.29969
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.36e3
  • 2.36e3
89.78965
  • 89.78965
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.59e3
  • 2.59e3
88.75118
  • 88.75118
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.62e3
  • 3.62e3
84.28343
  • 84.28343
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.88e3
  • 3.88e3
83.16650
  • 83.16650
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.19e3
  • 4.19e3
  • 6.30e3
81.81750
  • 81.81750
  • 72.67337
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
  • 5.30e3
77.88732
  • 77.88732
  • 77.01349
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.30e3
  • 7.30e3
  • 7.66e3
68.35087
  • 68.35087
  • 66.78237
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
8.77e3
  • 8.77e3
61.94700
  • 61.94700
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.81e3
  • 8.81e3
61.77781
  • 61.77781
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.30433
  • 52.30433
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.75608
  • 50.75608
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
50.63707
  • 50.63707
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.27016
  • 50.27016
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.52726
  • 47.52726
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.33e4
43.89990
  • 43.89990
  • 42.48870
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.32e4
  • 1.32e4
  • 1.34e4
42.94158
  • 42.94158
  • 41.69814
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.56755
  • 39.56755
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.72e4
37.69320
  • 37.69320
  • 25.38058
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
30.00182
  • 30.00182
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
24.81312
  • 24.81312
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020973 (BCAT1)
HGNCHGNC:976 (BCAT1)
Uniprot/SPTREMBLF6T9A6, F6T9A6_HORSE

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