E. caballus Gene: HLA-DOB - ENSECAG00000020976 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000020976
NameHLA-DOB
Descriptionmajor histocompatibility complex, class II, DO beta [Source:HGNC Symbol;Acc:HGNC:4937]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.40e3
  • 1.40e3
  • 2.24e3
93.93455
  • 93.93455
  • 90.29058
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
8.09e3
  • 8.09e3
64.90367
  • 64.90367
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.98e3
  • 9.98e3
56.73318
  • 56.73318
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.15050
  • 53.15050
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.35e4
41.96990
  • 41.96990
  • 41.61153
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.64943
  • 41.64943
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.64917
  • 41.64917
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.81580
  • 39.81580
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
38.07538
  • 38.07538
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.29071
  • 35.29071
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.13254
  • 34.13254
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.53e4
  • 1.53e4
  • 1.58e4
33.55163
  • 33.55163
  • 31.30112
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
30.74207
  • 30.74207
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
30.59604
  • 30.59604
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.69e4
  • 1.69e4
  • 1.71e4
26.70386
  • 26.70386
  • 25.85757
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
24.82882
  • 24.82882
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
20.37980
  • 20.37980
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000020976 (HLA-DOB)
HGNCHGNC:4937 (HLA-DOB)
Uniprot/SPTREMBLF6W3Z8, F6W3Z8_HORSE

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