E. caballus Gene: PAX6 - ENSECAG00000021000 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021000
NamePAX6
Descriptionpaired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
OrganismEquus caballus (horse)
Synonym(s)an, an2, d11s812e, wagr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.83e3
  • 1.83e3
  • 2.49e3
92.06883
  • 92.06883
  • 89.20402
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.82e3
  • 5.82e3
  • 7.14e3
74.78423
  • 74.78423
  • 69.03834
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
6.79e3
  • 6.79e3
  • 7.01e3
  • 9.09e3
  • 1.10e4
70.54712
  • 70.54712
  • 69.58598
  • 60.59765
  • 52.27254
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.07e3
  • 7.07e3
69.34302
  • 69.34302
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
7.10e3
  • 7.10e3
69.23099
  • 69.23099
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.63e3
  • 8.63e3
62.55532
  • 62.55532
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.23e4
  • 1.23e4
46.71384
  • 46.71384
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
44.47903
  • 44.47903
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.38e4
  • 1.38e4
40.22366
  • 40.22366
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
37.82062
  • 37.82062
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.99419
  • 35.99419
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.24110
  • 20.24110
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021000 (PAX6)
HGNCHGNC:8620 (PAX6)
Uniprot/SPTREMBLF6RG82, F6RG82_HORSE, F6RGC6, F6RGC6_HORSE

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