Gene: MKS1 - ENSECAG00000021080 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000021080
Name	MKS1
Description	Meckel syndrome, type 1 [Source:HGNC Symbol;Acc:HGNC:7121]
Organism	Equus caballus (horse)
Synonym(s)	bbs13, flj20345, mks, poc12

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	5.71e3 5.71e3	75.24921 75.24921	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle UBERON:0000112sexually immature stage	5.99e3 5.99e3 7.01e3 8.63e3 9.87e3	74.00659 74.00659 69.62016 62.57536 57.21083	AEIR AEIR AEIR AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.03e3 6.03e3	73.85978 73.85978	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	7.61e3 7.61e3	66.99545 66.99545	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	8.33e3 8.33e3 8.41e3	63.86798 63.86798 63.51329	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	8.36e3 8.36e3	63.73804 63.73804	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	9.06e3 9.06e3	60.71349 60.71349	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	9.12e3 9.12e3	60.44702 60.44702	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	9.50e3 9.50e3	58.78284 58.78284	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	9.66e3 9.66e3 9.86e3	58.09307 58.09307 57.23225	AEIR AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	1.01e4 1.01e4	56.31465 56.31465	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0007222late adult stage UBERON:0018241prime adult stage	1.01e4 1.01e4 1.02e4	56.31262 56.31262 55.76580	AEIR AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.02e4 1.02e4	55.67658 55.67658	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	1.04e4 1.04e4	54.85432 54.85432	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	1.05e4 1.05e4	54.49781 54.49781	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.07e4 1.07e4 1.07e4	53.75903 53.75903 53.50739	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	1.07e4 1.07e4	53.63378 53.63378	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	1.09e4 1.09e4	52.87939 52.87939	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	1.09e4 1.09e4	52.57375 52.57375	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.13e4 1.13e4 1.21e4	50.87392 50.87392 47.59860	AEIR AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	1.21e4 1.21e4	47.43510 47.43510	AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	1.24e4 1.24e4	46.28122 46.28122	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000021080 (MKS1)
HGNC	HGNC:7121 (MKS1)
Uniprot/SPTREMBL	F6RFR4, F6RFR4_HORSE