E. caballus Gene: LGI4 - ENSECAG00000021101 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021101
NameLGI4
Descriptionleucine-rich repeat LGI family member 4 [Source:HGNC Symbol;Acc:HGNC:18712]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.92e3
  • 4.92e3
78.65
  • 78.65
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
5.74e3
  • 5.74e3
75.13
  • 75.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.93e3
  • 5.93e3
  • 1.57e4
74.27
  • 74.27
  • 31.71
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.39e3
  • 7.39e3
  • 9.09e3
67.96
  • 67.96
  • 60.57
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
  • 9.43e3
64.34
  • 64.34
  • 59.11
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.23e3
  • 9.23e3
59.96
  • 59.96
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.49e3
  • 9.49e3
58.83
  • 58.83
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.15e4
  • 1.15e4
50.34
  • 50.34
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
44.08
  • 44.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
40.85
  • 40.85
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.83
  • 40.83
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.96
  • 38.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.25
  • 38.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.50
  • 36.50
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.39
  • 36.39
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.09
  • 36.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021101 (LGI4)
HGNCHGNC:18712 (LGI4)
Uniprot/SPTREMBLF6WFY6, F6WFY6_HORSE

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