E. caballus Gene: RNPC3 - ENSECAG00000021148 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021148
NameRNPC3
DescriptionRNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
OrganismEquus caballus (horse)
Synonym(s)flj20008, kiaa1839, rbm40, snrnp65

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.45e3
  • 1.45e3
93.72251
  • 93.72251
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.35e3
  • 3.35e3
  • 3.42e3
85.48718
  • 85.48718
  • 85.17587
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.91e3
  • 3.91e3
  • 6.09e3
83.05070
  • 83.05070
  • 73.57011
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.01e3
  • 4.01e3
82.59670
  • 82.59670
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.67e3
  • 4.67e3
79.75474
  • 79.75474
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.97e3
  • 4.97e3
  • 6.03e3
78.45743
  • 78.45743
  • 73.83740
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.24e3
  • 5.24e3
77.27380
  • 77.27380
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.29e3
  • 5.29e3
77.06341
  • 77.06341
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.42e3
  • 5.42e3
  • 5.84e3
76.48133
  • 76.48133
  • 74.66453
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.80e3
  • 5.80e3
74.86993
  • 74.86993
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.26e3
  • 6.26e3
72.85401
  • 72.85401
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.68e3
  • 6.68e3
  • 8.20e3
  • 8.91e3
  • 1.29e4
71.03244
  • 71.03244
  • 64.43163
  • 61.38192
  • 44.08102
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.25e3
  • 7.25e3
68.55987
  • 68.55987
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.92e3
  • 7.92e3
65.65000
  • 65.65000
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.21e3
  • 8.21e3
64.38604
  • 64.38604
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.23e3
  • 8.23e3
  • 8.35e3
64.29245
  • 64.29245
  • 63.78774
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.56e3
  • 8.56e3
62.88121
  • 62.88121
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.54e3
  • 9.54e3
58.62480
  • 58.62480
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
9.75e3
  • 9.75e3
57.73891
  • 57.73891
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
55.30750
  • 55.30750
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.14265
  • 54.14265
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.93134
  • 51.93134
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021148 (RNPC3)
HGNCHGNC:18666 (RNPC3)
Uniprot/SPTREMBLF6VNF6, F6VNF6_HORSE

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