E. caballus Gene: TNRC18 - ENSECAG00000021171 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021171
NameTNRC18
Descriptiontrinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
OrganismEquus caballus (horse)
Synonym(s)cagl79, kiaa1856, tnrc18a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.35e3
  • 2.35e3
89.83246
  • 89.83246
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.64e3
  • 3.64e3
84.22241
  • 84.22241
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
83.65724
  • 83.65724
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.35e3
  • 4.35e3
81.14165
  • 81.14165
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.87e3
  • 5.87e3
74.54812
  • 74.54812
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.91e3
  • 5.91e3
74.37607
  • 74.37607
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.01e3
  • 6.01e3
73.92826
  • 73.92826
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.62e3
  • 6.62e3
  • 6.63e3
  • 7.38e3
  • 7.92e3
71.28711
  • 71.28711
  • 71.26890
  • 68.01405
  • 65.65945
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.84e3
  • 6.84e3
70.33309
  • 70.33309
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
70.23320
  • 70.23320
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.21e3
  • 7.21e3
  • 7.38e3
68.72728
  • 68.72728
  • 67.99683
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.42e3
  • 7.42e3
67.82162
  • 67.82162
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.76e3
  • 7.76e3
66.33131
  • 66.33131
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.97e3
  • 7.97e3
65.42278
  • 65.42278
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.62e3
  • 8.62e3
  • 9.06e3
62.63582
  • 62.63582
  • 60.71267
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.85e3
  • 8.85e3
  • 9.42e3
61.63404
  • 61.63404
  • 59.14473
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
59.93078
  • 59.93078
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.73e3
  • 9.73e3
57.80162
  • 57.80162
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.82e3
  • 9.82e3
  • 1.02e4
57.40977
  • 57.40977
  • 55.81502
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.13e4
55.05031
  • 55.05031
  • 51.11246
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
50.75803
  • 50.75803
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
50.07108
  • 50.07108
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.35e4
  • 1.35e4
41.34662
  • 41.34662
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021171 (TNRC18)
HGNCHGNC:11962 (TNRC18)
Uniprot/SPTREMBLF6URG1, F6URG1_HORSE

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