Gene: SYS1 - ENSECAG00000021199 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000021199
Name	SYS1
Description	Sys1 golgi trafficking protein [Source:HGNC Symbol;Acc:HGNC:16162]
Organism	Equus caballus (horse)
Synonym(s)	c20orf169, dj453c12.4

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	2.52e3 2.52e3	89.05729 89.05729	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.59e3 2.59e3	88.78232 88.78232	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	2.71e3 2.71e3 3.13e3	88.27250 88.27250 86.44052	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0007222late adult stage UBERON:0018241prime adult stage	2.73e3 2.73e3 2.90e3	88.15978 88.15978 87.40773	AEIR AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	2.82e3 2.82e3	87.76593 87.76593	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	2.87e3 2.87e3	87.54192 87.54192	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	3.01e3 3.01e3	86.93707 86.93707	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	3.08e3 3.08e3	86.65082 86.65082	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	3.09e3 3.09e3	86.58282 86.58282	AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	3.39e3 3.39e3	85.30997 85.30997	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	3.74e3 3.74e3	83.76983 83.76983	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	3.77e3 3.77e3 3.83e3	83.65802 83.65802 83.39099	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.88e3 3.88e3 4.15e3 5.95e3 6.09e3	83.17960 83.17960 81.98903 74.18138 73.59873	AEIR AEIR AEIR AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	3.89e3 3.89e3	83.11576 83.11576	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	4.08e3 4.08e3	82.31066 82.31066	AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	4.24e3 4.24e3	81.63209 81.63209	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	4.53e3 4.53e3 6.23e3	80.34003 80.34003 72.97216	AEIR AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	4.55e3 4.55e3	80.26873 80.26873	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.00e3 5.00e3	78.30524 78.30524	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	5.20e3 5.20e3 5.36e3	77.46016 77.46016 76.75539	AEIR AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	5.55e3 5.55e3	75.91781 75.91781	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	5.90e3 5.90e3	74.40066 74.40066	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000021199 (SYS1)
HGNC	HGNC:16162 (SYS1)
Uniprot/SPTREMBL	F6U493, F6U493_HORSE