E. caballus Gene: SYS1 - ENSECAG00000021199 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021199
NameSYS1
DescriptionSys1 golgi trafficking protein [Source:HGNC Symbol;Acc:HGNC:16162]
OrganismEquus caballus (horse)
Synonym(s)c20orf169, dj453c12.4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
2.52e3
  • 2.52e3
89.05729
  • 89.05729
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
88.78232
  • 88.78232
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.71e3
  • 2.71e3
  • 3.13e3
88.27250
  • 88.27250
  • 86.44052
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.73e3
  • 2.73e3
  • 2.90e3
88.15978
  • 88.15978
  • 87.40773
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
87.76593
  • 87.76593
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
2.87e3
  • 2.87e3
87.54192
  • 87.54192
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
86.93707
  • 86.93707
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.08e3
  • 3.08e3
86.65082
  • 86.65082
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.09e3
  • 3.09e3
86.58282
  • 86.58282
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.39e3
  • 3.39e3
85.30997
  • 85.30997
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
3.74e3
  • 3.74e3
83.76983
  • 83.76983
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
  • 3.83e3
83.65802
  • 83.65802
  • 83.39099
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.88e3
  • 3.88e3
  • 4.15e3
  • 5.95e3
  • 6.09e3
83.17960
  • 83.17960
  • 81.98903
  • 74.18138
  • 73.59873
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.89e3
  • 3.89e3
83.11576
  • 83.11576
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.08e3
  • 4.08e3
82.31066
  • 82.31066
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.24e3
  • 4.24e3
81.63209
  • 81.63209
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.53e3
  • 4.53e3
  • 6.23e3
80.34003
  • 80.34003
  • 72.97216
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.55e3
  • 4.55e3
80.26873
  • 80.26873
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.00e3
  • 5.00e3
78.30524
  • 78.30524
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.20e3
  • 5.20e3
  • 5.36e3
77.46016
  • 77.46016
  • 76.75539
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.55e3
  • 5.55e3
75.91781
  • 75.91781
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.90e3
  • 5.90e3
74.40066
  • 74.40066
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021199 (SYS1)
HGNCHGNC:16162 (SYS1)
Uniprot/SPTREMBLF6U493, F6U493_HORSE

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