E. caballus Gene: SH3RF1 - ENSECAG00000021240 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021240
NameSH3RF1
DescriptionSH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
OrganismEquus caballus (horse)
Synonym(s)kiaa1494, posh, rnf142, sh3md2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.86e3
  • 4.86e3
78.93416
  • 78.93416
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
5.45e3
  • 5.45e3
76.38296
  • 76.38296
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
74.41155
  • 74.41155
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
72.34293
  • 72.34293
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
70.90866
  • 70.90866
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
68.52743
  • 68.52743
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.53e3
  • 7.53e3
67.33443
  • 67.33443
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.89e3
  • 7.89e3
65.79980
  • 65.79980
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.00e3
  • 8.00e3
65.32632
  • 65.32632
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.00e3
  • 8.00e3
65.30303
  • 65.30303
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.23e3
  • 8.23e3
64.33070
  • 64.33070
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.24e3
  • 8.24e3
64.28256
  • 64.28256
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.94e3
  • 8.94e3
61.22280
  • 61.22280
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.45e3
  • 9.45e3
59.01657
  • 59.01657
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
  • 1.08e4
55.23984
  • 55.23984
  • 53.34801
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
  • 1.10e4
54.62411
  • 54.62411
  • 52.22275
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.15e4
  • 1.25e4
  • 1.26e4
52.44399
  • 52.44399
  • 50.29193
  • 45.79425
  • 45.30511
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.48289
  • 51.48289
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
  • 1.19e4
48.79212
  • 48.79212
  • 48.37082
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.44e4
47.89140
  • 47.89140
  • 37.34458
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.85822
  • 40.85822
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021240 (SH3RF1)
HGNCHGNC:17650 (SH3RF1)
Uniprot/SPTREMBLF6R887, F6R887_HORSE

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