E. caballus Gene: TRAT1 - ENSECAG00000021248 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021248
NameTRAT1
DescriptionT cell receptor associated transmembrane adaptor 1 [Source:HGNC Symbol;Acc:HGNC:30698]
OrganismEquus caballus (horse)
Synonym(s)hspc062, tcrim, trim

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
781
  • 781
  • 889
96.62
  • 96.62
  • 96.15
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.10e3
  • 6.10e3
73.54
  • 73.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.46e3
  • 9.46e3
  • 1.03e4
  • 1.20e4
  • 1.37e4
58.98
  • 58.98
  • 55.23
  • 47.89
  • 40.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.99e3
  • 9.99e3
  • 1.56e4
56.69
  • 56.69
  • 32.40
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.88
  • 55.88
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.15e4
55.41
  • 55.41
  • 50.31
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
54.70
  • 54.70
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.43
  • 52.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.36
  • 52.36
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.20e4
  • 1.20e4
  • 1.47e4
47.99
  • 47.99
  • 36.16
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.18
  • 45.18
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
39.07
  • 39.07
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.44e4
  • 1.44e4
37.66
  • 37.66
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
35.45
  • 35.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021248 (TRAT1)
HGNCHGNC:30698 (TRAT1)
Uniprot/SPTREMBLF6U3X7, F6U3X7_HORSE

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