E. caballus Gene: KDM5A - ENSECAG00000021281 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021281
NameKDM5A
Descriptionlysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
OrganismEquus caballus (horse)
Synonym(s)jarid1a, rbbp2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.74e3
  • 4.74e3
79.45713
  • 79.45713
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.94e3
  • 4.94e3
78.56577
  • 78.56577
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.43e3
  • 5.43e3
76.46862
  • 76.46862
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.72e3
  • 5.72e3
  • 5.75e3
75.19907
  • 75.19907
  • 75.04563
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.90e3
  • 5.90e3
  • 6.90e3
74.41927
  • 74.41927
  • 70.06376
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.24e3
  • 6.24e3
  • 6.25e3
72.94531
  • 72.94531
  • 72.88919
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
71.96261
  • 71.96261
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
71.89253
  • 71.89253
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
6.80e3
  • 6.80e3
70.52474
  • 70.52474
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.84e3
  • 6.84e3
70.34011
  • 70.34011
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
6.87e3
  • 6.87e3
70.19027
  • 70.19027
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
  • 8.00e3
67.23923
  • 67.23923
  • 65.28777
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
  • 7.67e3
  • 7.82e3
  • 8.13e3
66.91426
  • 66.91426
  • 66.74476
  • 66.08839
  • 64.74845
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
7.92e3
  • 7.92e3
65.65720
  • 65.65720
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.03e3
  • 8.03e3
65.19742
  • 65.19742
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.80e3
  • 8.80e3
  • 9.16e3
61.85106
  • 61.85106
  • 60.27068
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.81e3
  • 8.81e3
61.79755
  • 61.79755
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.85e3
  • 8.85e3
61.63317
  • 61.63317
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.28e3
  • 9.28e3
59.75435
  • 59.75435
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
58.75075
  • 58.75075
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.67e3
  • 9.67e3
58.05478
  • 58.05478
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.93486
  • 51.93486
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021281 (KDM5A)
HGNCHGNC:9886 (KDM5A)
Uniprot/SPTREMBLF6XU23, F6XU23_HORSE

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