E. caballus Gene: SHROOM4 - ENSECAG00000021309 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021309
NameSHROOM4
Descriptionshroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
OrganismEquus caballus (horse)
Synonym(s)kiaa1202

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
6.37e3
  • 6.37e3
72.38856
  • 72.38856
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.90e3
  • 6.90e3
  • 7.92e3
70.09810
  • 70.09810
  • 65.67190
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.07e3
  • 7.07e3
69.32550
  • 69.32550
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.38e3
  • 7.38e3
68.01783
  • 68.01783
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.72e3
  • 7.72e3
  • 8.62e3
66.50909
  • 66.50909
  • 62.62679
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.23e3
  • 8.23e3
  • 9.35e3
64.31400
  • 64.31400
  • 59.44399
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
8.31e3
  • 8.31e3
63.95069
  • 63.95069
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.35e3
  • 8.35e3
63.79412
  • 63.79412
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.55e3
  • 8.55e3
62.92172
  • 62.92172
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.74e3
  • 9.74e3
57.74398
  • 57.74398
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.34718
  • 50.34718
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.24578
  • 49.24578
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.15600
  • 46.15600
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
45.51902
  • 45.51902
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.30e4
45.04979
  • 45.04979
  • 43.71254
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.72e4
44.86395
  • 44.86395
  • 25.31986
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.80609
  • 44.80609
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.10175
  • 43.10175
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.84417
  • 39.84417
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
39.33161
  • 39.33161
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021309 (SHROOM4)
HGNCHGNC:29215 (SHROOM4)
Uniprot/SPTREMBLF6WG59, F6WG59_HORSE

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