E. caballus Gene: COL4A2 - ENSECAG00000021314 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021314
NameCOL4A2
Descriptioncollagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:HGNC:2203]
OrganismEquus caballus (horse)
Synonym(s)dkfzp686i14213, flj22259

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
225
  • 225
99.02637
  • 99.02637
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
263
  • 263
98.86312
  • 98.86312
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
729
  • 729
96.84066
  • 96.84066
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.35e3
  • 2.35e3
89.82361
  • 89.82361
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
2.55e3
  • 2.55e3
88.95546
  • 88.95546
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.81e3
  • 2.81e3
  • 4.02e3
87.79885
  • 87.79885
  • 82.57362
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.86e3
  • 2.86e3
  • 3.72e3
87.60181
  • 87.60181
  • 83.85553
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.33e3
  • 3.33e3
85.54782
  • 85.54782
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.95e3
  • 3.95e3
82.86009
  • 82.86009
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.20e3
  • 4.20e3
81.79928
  • 81.79928
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.22e3
  • 4.22e3
81.72221
  • 81.72221
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.62e3
  • 4.62e3
  • 8.06e3
  • 8.24e3
  • 1.20e4
79.98265
  • 79.98265
  • 65.05885
  • 64.28417
  • 47.87982
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.93e3
  • 4.93e3
78.62398
  • 78.62398
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.90e3
  • 8.90e3
61.40465
  • 61.40465
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.19e3
  • 9.19e3
60.14395
  • 60.14395
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.20e3
  • 9.20e3
60.11229
  • 60.11229
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.68e3
  • 9.68e3
  • 9.72e3
58.00195
  • 58.00195
  • 57.84235
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
51.99540
  • 51.99540
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.16e4
51.39177
  • 51.39177
  • 49.59015
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.16e4
  • 1.16e4
49.49295
  • 49.49295
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
48.61973
  • 48.61973
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.31e4
  • 1.31e4
43.09754
  • 43.09754
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.69320
  • 40.69320
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021314 (COL4A2)
HGNCHGNC:2203 (COL4A2)
Uniprot/SPTREMBLF6Q0M8, F6Q0M8_HORSE

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