E. caballus Gene: COL26A1 - ENSECAG00000021392 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021392
NameCOL26A1
Descriptioncollagen, type XXVI, alpha 1 [Source:HGNC Symbol;Acc:HGNC:18038]
OrganismEquus caballus (horse)
Synonym(s)emi6, emid2, emu2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.38e3
  • 1.38e3
94.03
  • 94.03
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
56.01
  • 56.01
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.30
  • 47.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.27e4
  • 1.27e4
  • 1.29e4
  • 1.33e4
  • 1.52e4
44.71
  • 44.71
  • 44.19
  • 42.40
  • 33.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.41
  • 44.41
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.28
  • 42.28
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.80
  • 39.80
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
  • 1.58e4
34.25
  • 34.25
  • 31.59
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
28.81
  • 28.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021392 (COL26A1)
HGNCHGNC:18038 (COL26A1)
Uniprot/SPTREMBLF6QYZ0, F6QYZ0_HORSE

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