E. caballus Gene: JMJD4 - ENSECAG00000021407 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021407
NameJMJD4
Descriptionjumonji domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25724]
OrganismEquus caballus (horse)
Synonym(s)flj12517

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.05e3
  • 3.05e3
  • 3.23e3
86.75851
  • 86.75851
  • 86.01292
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.36e3
  • 3.36e3
85.42421
  • 85.42421
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.64e3
  • 3.64e3
84.22713
  • 84.22713
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.69e3
  • 3.69e3
83.98183
  • 83.98183
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.79e3
  • 3.79e3
  • 4.40e3
83.54842
  • 83.54842
  • 80.92501
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
3.97e3
  • 3.97e3
82.77942
  • 82.77942
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.41e3
  • 4.41e3
  • 4.70e3
80.88090
  • 80.88090
  • 79.61925
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.57e3
  • 4.57e3
  • 6.17e3
  • 6.39e3
  • 8.61e3
80.16459
  • 80.16459
  • 73.26304
  • 72.28399
  • 62.65776
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.62e3
  • 4.62e3
  • 5.16e3
79.95797
  • 79.95797
  • 77.60862
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.01e3
  • 5.01e3
78.26313
  • 78.26313
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.01e3
  • 5.01e3
78.25741
  • 78.25741
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.19e3
  • 5.19e3
77.48033
  • 77.48033
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
76.83467
  • 76.83467
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.69e3
  • 5.69e3
75.30494
  • 75.30494
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
6.03e3
  • 6.03e3
73.84018
  • 73.84018
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
72.67190
  • 72.67190
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.61e3
  • 6.61e3
71.34367
  • 71.34367
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.65e3
  • 6.65e3
71.18328
  • 71.18328
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
7.02e3
  • 7.02e3
69.57570
  • 69.57570
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
7.19e3
  • 7.19e3
68.83246
  • 68.83246
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.21e3
  • 7.21e3
68.75491
  • 68.75491
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.12e3
  • 8.12e3
  • 8.19e3
64.80028
  • 64.80028
  • 64.47677
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.13e4
  • 1.13e4
50.94262
  • 50.94262
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021407 (JMJD4)
HGNCHGNC:25724 (JMJD4)
Uniprot/SPTREMBLF6S5P6, F6S5P6_HORSE

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