E. caballus Gene: CDH1 - ENSECAG00000021418 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021418
NameCDH1
Descriptioncadherin 1, type 1 [Source:HGNC Symbol;Acc:HGNC:1748]
OrganismEquus caballus (horse)
Synonym(s)cd324, uvo, uvomorulin

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
351
  • 351
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
516
  • 516
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
581
  • 581
97.49
  • 97.49
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
592
  • 592
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
625
  • 625
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
743
  • 743
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
894
  • 894
96.13
  • 96.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
912
  • 912
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.57e3
  • 1.57e3
93.20
  • 93.20
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.60e3
  • 1.60e3
93.07
  • 93.07
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.98e3
  • 7.98e3
65.42
  • 65.42
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
  • 1.38e4
49.38
  • 49.38
  • 39.94
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.86
  • 40.86
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.45e4
40.74
  • 40.74
  • 37.04
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.81
  • 36.81
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.06
  • 36.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
33.70
  • 33.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.65e4
  • 1.65e4
  • 1.69e4
28.37
  • 28.37
  • 26.77
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021418 (CDH1)
HGNCHGNC:1748 (CDH1)
Uniprot/SPTREMBLF6Y0D9, F6Y0D9_HORSE

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