E. caballus Gene: TMED1 - ENSECAG00000021522 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021522
NameTMED1
Descriptiontransmembrane p24 trafficking protein 1 [Source:HGNC Symbol;Acc:HGNC:17291]
OrganismEquus caballus (horse)
Synonym(s)il1rl1l, il1rl1lg, mgc1270, p24g1, p24gamma1, st2l

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.89e3
  • 3.89e3
83.13866
  • 83.13866
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.33e3
  • 4.33e3
81.22297
  • 81.22297
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.79e3
  • 4.79e3
  • 5.02e3
79.21672
  • 79.21672
  • 78.24877
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.82e3
  • 4.82e3
  • 4.84e3
  • 5.79e3
  • 7.30e3
79.09320
  • 79.09320
  • 79.00863
  • 74.89699
  • 68.33877
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.84e3
  • 4.84e3
79.02797
  • 79.02797
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.17e3
  • 5.17e3
  • 5.59e3
77.60116
  • 77.60116
  • 75.77161
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
74.25289
  • 74.25289
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.97e3
  • 5.97e3
74.10890
  • 74.10890
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.05e3
  • 6.05e3
73.74732
  • 73.74732
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.11e3
  • 6.11e3
73.50462
  • 73.50462
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.87e3
  • 6.87e3
70.20493
  • 70.20493
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.23e3
  • 7.23e3
68.64475
  • 68.64475
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.83e3
  • 7.83e3
  • 8.14e3
66.03049
  • 66.03049
  • 64.69059
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
8.09e3
  • 8.09e3
64.90892
  • 64.90892
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
64.18307
  • 64.18307
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.36e3
  • 8.36e3
63.73782
  • 63.73782
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.07e3
  • 9.07e3
  • 9.63e3
60.66318
  • 60.66318
  • 58.21668
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.06e4
  • 1.06e4
  • 1.19e4
54.21347
  • 54.21347
  • 48.54374
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
51.21729
  • 51.21729
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
45.80227
  • 45.80227
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
42.64727
  • 42.64727
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.47e4
  • 1.47e4
36.46528
  • 36.46528
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021522 (TMED1)
HGNCHGNC:17291 (TMED1)
Uniprot/SPTREMBLF6YEA3, F6YEA3_HORSE

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