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E. caballus Gene: BTF3 - ENSECAG00000021629 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021629
NameBTF3
Descriptionbasic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
OrganismEquus caballus (horse)
Synonym(s)btf3a, btf3b, nacb
Orthologs(s)29 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
177
  • 177
  • 218
99.24
  • 99.24
  • 99.06
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
199
  • 199
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
199
  • 199
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
205
  • 205
99.12
  • 99.12
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
208
  • 208
99.10
  • 99.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
224
  • 224
99.03
  • 99.03
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
238
  • 238
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
248
  • 248
98.93
  • 98.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
252
  • 252
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
253
  • 253
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
263
  • 263
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
272
  • 272
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
279
  • 279
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
284
  • 284
  • 337
  • 344
  • 349
98.77
  • 98.77
  • 98.54
  • 98.51
  • 98.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
288
  • 288
98.76
  • 98.76
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
301
  • 301
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
302
  • 302
  • 306
98.69
  • 98.69
  • 98.68
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
355
  • 355
  • 391
98.46
  • 98.46
  • 98.31
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
361
  • 361
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
609
  • 609
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
734
  • 734
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
735
  • 735
  • 802
96.82
  • 96.82
  • 96.53
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
858
  • 858
  • 1.37e3
96.28
  • 96.28
  • 94.07
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.01e3
  • 1.01e3
95.62
  • 95.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species15 genesCompare expression
Theria13 species16 genesCompare expression
Mammalia14 species17 genesCompare expression
Amniota16 species20 genesCompare expression
Tetrapoda17 species21 genesCompare expression
Euteleostomi18 species22 genesCompare expression
Bilateria25 species29 genesCompare expression

Orthology information comes from OMA : ENSECAG00000021629.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000021629.

Cross-references

EnsemblENSECAG00000021629 (BTF3)
HGNCHGNC:1125 (BTF3)
Uniprot/SPTREMBLF6YY47, F6YY47_HORSE

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