E. caballus Gene: SPDEF - ENSECAG00000021717 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021717
NameSPDEF
DescriptionSAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
OrganismEquus caballus (horse)
Synonym(s)ba375e1.3, pdef

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
634
  • 634
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.46e3
  • 1.46e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.97e3
  • 3.97e3
82.79
  • 82.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
67.02
  • 67.02
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.44e4
  • 1.48e4
  • 1.63e4
41.76
  • 41.76
  • 37.56
  • 35.63
  • 29.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
31.70
  • 31.70
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
1.61e4
  • 1.61e4
30.10
  • 30.10
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.09
  • 30.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.89
  • 29.89
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
23.19
  • 23.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021717 (SPDEF)
HGNCHGNC:17257 (SPDEF)
Uniprot/SPTREMBLF6Z5M2, F6Z5M2_HORSE

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