E. caballus Gene: TRIM62 - ENSECAG00000021887 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021887
NameTRIM62
Descriptiontripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
OrganismEquus caballus (horse)
Synonym(s)dear1, flj10759

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
  • 1.08e4
54.97
  • 54.97
  • 53.08
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.13e4
54.18
  • 54.18
  • 50.83
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.13e4
  • 1.25e4
  • 1.27e4
53.50
  • 53.50
  • 51.05
  • 45.92
  • 44.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
52.32
  • 52.32
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.57
  • 51.57
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
51.56
  • 51.56
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.16
  • 47.16
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.41
  • 45.41
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.39
  • 45.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.26
  • 45.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.74
  • 44.74
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.28e4
44.46
  • 44.46
  • 44.36
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
44.26
  • 44.26
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.70
  • 43.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.53
  • 43.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
40.61
  • 40.61
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.82
  • 39.82
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
30.51
  • 30.51
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
27.98
  • 27.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021887 (TRIM62)
HGNCHGNC:25574 (TRIM62)
Uniprot/SPTREMBLF6X4R2, F6X4R2_HORSE

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