E. caballus Gene: C9orf43 - ENSECAG00000021947 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021947
NameC9orf43
Descriptionchromosome 9 open reading frame 43 [Source:HGNC Symbol;Acc:HGNC:23570]
OrganismEquus caballus (horse)
Synonym(s)mgc17358

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
603
  • 603
  • 626
  • 1.74e3
  • 3.13e3
97.39
  • 97.39
  • 97.29
  • 92.45
  • 86.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.79e3
  • 3.79e3
  • 6.90e3
83.59
  • 83.59
  • 70.10
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.29e3
  • 6.29e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.15e3
  • 7.15e3
68.97
  • 68.97
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.20e3
  • 8.20e3
  • 1.50e4
64.43
  • 64.43
  • 34.97
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.50e3
  • 8.50e3
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
56.18
  • 56.18
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.43
  • 54.43
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.36e4
54.12
  • 54.12
  • 40.87
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.16e4
  • 1.16e4
49.85
  • 49.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.09
  • 49.09
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
48.10
  • 48.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.06
  • 40.06
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.73
  • 37.73
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
32.65
  • 32.65
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.58
  • 29.58
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
  • 1.82e4
28.62
  • 28.62
  • 20.96
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.75e4
  • 1.75e4
24.25
  • 24.25
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
23.41
  • 23.41
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
  • 1.79e4
22.92
  • 22.92
  • 22.32
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021947 (C9orf43)
HGNCHGNC:23570 (C9orf43)
Uniprot/SPTREMBLF6X404, F6X404_HORSE

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