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E. caballus Gene: TRIM24 - ENSECAG00000021957 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021957
NameTRIM24
Descriptiontripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
OrganismEquus caballus (horse)
Synonym(s)htif1, rnf82, tif1, tif1a
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
657
  • 657
  • 980
  • 1.14e3
  • 4.53e3
97.16
  • 97.16
  • 95.75
  • 95.05
  • 80.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.11e3
  • 1.11e3
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
93.32
  • 93.32
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.03e3
  • 4.03e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.63e3
  • 4.63e3
79.93
  • 79.93
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.46e3
  • 5.46e3
  • 5.61e3
76.32
  • 76.32
  • 75.67
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.96e3
  • 5.96e3
74.15
  • 74.15
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.98e3
  • 5.98e3
74.06
  • 74.06
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
  • 6.61e3
73.75
  • 73.75
  • 71.35
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.22e3
  • 6.22e3
  • 6.43e3
73.05
  • 73.05
  • 72.13
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.24e3
  • 7.24e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
  • 7.49e3
68.51
  • 68.51
  • 67.55
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
68.51
  • 68.51
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
67.44
  • 67.44
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
67.02
  • 67.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.04e3
  • 8.04e3
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.44e3
  • 8.44e3
63.40
  • 63.40
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.51e3
  • 8.51e3
  • 1.08e4
63.13
  • 63.13
  • 53.20
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.29e3
  • 9.29e3
59.70
  • 59.70
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.35e3
  • 9.35e3
59.46
  • 59.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSECAG00000021957.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000021957.

Cross-references

EnsemblENSECAG00000021957 (TRIM24)
HGNCHGNC:11812 (TRIM24)
Uniprot/SPTREMBLF6Z2A3, F6Z2A3_HORSE

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