E. caballus Gene: TRAPPC3L - ENSECAG00000021978 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021978
NameTRAPPC3L
Descriptiontrafficking protein particle complex 3-like [Source:HGNC Symbol;Acc:HGNC:21090]
OrganismEquus caballus (horse)
Synonym(s)ba259p20.2, bet3l, flj11180

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
74.62
  • 74.62
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.00e3
  • 9.00e3
  • 1.09e4
60.97
  • 60.97
  • 52.69
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
9.77e3
  • 9.77e3
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.33e4
46.22
  • 46.22
  • 42.21
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.47e4
  • 1.74e4
  • 2.27e4
41.74
  • 41.74
  • 36.33
  • 24.50
  • 1.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
31.84
  • 31.84
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.94
  • 29.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
28.97
  • 28.97
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
24.11
  • 24.11
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.82e4
  • 1.82e4
21.07
  • 21.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.86e4
  • 1.86e4
19.42
  • 19.42
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
15.70
  • 15.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.96e4
  • 1.96e4
15.05
  • 15.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021978 (TRAPPC3L)
HGNCHGNC:21090 (TRAPPC3L)
Uniprot/SPTREMBLF6YFE5, F6YFE5_HORSE

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