E. caballus Gene: DDX58 - ENSECAG00000021989 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000021989
NameDDX58
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:HGNC Symbol;Acc:HGNC:19102]
OrganismEquus caballus (horse)
Synonym(s)dkfzp434j1111, flj13599, rig-i

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.46e3
  • 2.46e3
  • 3.10e3
89.35
  • 89.35
  • 86.58
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
4.85e3
  • 4.85e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.39e3
  • 6.39e3
  • 8.83e3
72.30
  • 72.30
  • 61.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.82e3
  • 6.82e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
7.15e3
  • 7.15e3
68.97
  • 68.97
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
7.20e3
  • 7.20e3
68.79
  • 68.79
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.42e3
  • 7.42e3
67.81
  • 67.81
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.48e3
  • 7.48e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
7.57e3
  • 7.57e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
  • 8.12e3
66.92
  • 66.92
  • 64.78
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.66e3
  • 7.66e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
66.23
  • 66.23
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.83e3
  • 7.83e3
  • 8.89e3
66.05
  • 66.05
  • 61.44
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.93e3
  • 7.93e3
65.62
  • 65.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.14e3
  • 8.14e3
  • 9.33e3
  • 1.05e4
  • 1.09e4
64.71
  • 64.71
  • 59.53
  • 54.62
  • 52.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
9.13e3
  • 9.13e3
60.41
  • 60.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.29e3
  • 9.29e3
59.69
  • 59.69
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.60e3
  • 9.60e3
58.37
  • 58.37
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
58.00
  • 58.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.23e4
55.75
  • 55.75
  • 46.72
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.12
  • 52.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000021989 (DDX58)
HGNCHGNC:19102 (DDX58)
Uniprot/SPTREMBLF6YV16, F6YV16_HORSE

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