E. caballus Gene: CDC42SE1 - ENSECAG00000022023 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022023
NameCDC42SE1
DescriptionCDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
OrganismEquus caballus (horse)
Synonym(s)scip1, spec1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
182
  • 182
  • 212
99.21
  • 99.21
  • 99.08
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
188
  • 188
  • 195
99.19
  • 99.19
  • 99.16
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
204
  • 204
  • 730
  • 1.11e3
  • 5.02e3
99.12
  • 99.12
  • 96.84
  • 95.21
  • 78.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
279
  • 279
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
295
  • 295
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
300
  • 300
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
334
  • 334
  • 1.03e3
98.56
  • 98.56
  • 95.52
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
384
  • 384
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
541
  • 541
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
587
  • 587
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
599
  • 599
97.41
  • 97.41
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
642
  • 642
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
752
  • 752
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
815
  • 815
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
835
  • 835
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
913
  • 913
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
949
  • 949
95.89
  • 95.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.40e3
  • 1.40e3
  • 1.52e3
93.95
  • 93.95
  • 93.40
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.54e3
  • 3.54e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.06e3
  • 4.06e3
  • 6.88e3
82.41
  • 82.41
  • 70.15
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.32e3
  • 4.32e3
81.27
  • 81.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022023 (CDC42SE1)
HGNCHGNC:17719 (CDC42SE1)
Uniprot/SPTREMBLF6YQ69, F6YQ69_HORSE

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