E. caballus Gene: RCN1 - ENSECAG00000022068 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022068
NameRCN1
Descriptionreticulocalbin 1 [Source:HGNC Symbol;Acc:HGNC:9934]
OrganismEquus caballus (horse)
Synonym(s)flj37041, pig20, rcal, rcn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
362
  • 362
98.43
  • 98.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
658
  • 658
  • 1.82e3
  • 3.66e3
  • 4.50e3
97.15
  • 97.15
  • 92.10
  • 84.13
  • 80.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
668
  • 668
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
717
  • 717
96.89
  • 96.89
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.06e3
  • 1.06e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
94.61
  • 94.61
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.41e3
  • 1.41e3
93.88
  • 93.88
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.55e3
  • 1.55e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.74e3
  • 2.74e3
  • 3.35e3
88.14
  • 88.14
  • 85.46
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.98e3
  • 2.98e3
  • 3.17e3
87.08
  • 87.08
  • 86.28
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.58e3
  • 3.58e3
  • 3.78e3
84.46
  • 84.46
  • 83.62
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.71e3
  • 3.71e3
83.91
  • 83.91
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.75e3
  • 3.75e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.79e3
  • 3.79e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.85e3
  • 3.85e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.96e3
  • 3.96e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.56e3
  • 4.56e3
  • 5.06e3
80.24
  • 80.24
  • 78.08
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.32e3
  • 5.32e3
76.94
  • 76.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.07e3
  • 9.07e3
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
52.04
  • 52.04
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
  • 1.40e4
46.54
  • 46.54
  • 39.22
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022068 (RCN1)
HGNCHGNC:9934 (RCN1)
Uniprot/SPTREMBLF6XFY1, F6XFY1_HORSE

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