E. caballus Gene: DRB - ENSECAG00000022072 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022072
NameDRB
DescriptionEquus caballus MHC class II DR-beta chain (DRB), mRNA [Source:RefSeq mRNA;Acc:NM_001142811]
OrganismEquus caballus (horse)
Synonym(s)eqca-drb1, eqca-drb3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
99.7
  • 99.7
  • 130
99.57
  • 99.57
  • 99.44
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
302
  • 302
98.69
  • 98.69
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
318
  • 318
98.63
  • 98.63
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
486
  • 486
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
710
  • 710
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
797
  • 797
  • 1.91e3
  • 2.68e3
  • 3.09e3
96.55
  • 96.55
  • 91.74
  • 88.38
  • 86.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
829
  • 829
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
931
  • 931
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.14e3
  • 1.14e3
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.37e3
  • 1.37e3
  • 2.21e3
94.07
  • 94.07
  • 90.42
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.52e3
  • 1.52e3
  • 2.96e3
93.39
  • 93.39
  • 87.18
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.54e3
  • 1.54e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.64e3
  • 1.64e3
92.91
  • 92.91
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.09e3
  • 2.09e3
  • 2.36e3
90.94
  • 90.94
  • 89.75
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.04e3
  • 3.04e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.44e3
  • 3.44e3
  • 6.39e3
85.09
  • 85.09
  • 72.29
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
84.10
  • 84.10
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.59e3
  • 4.59e3
80.11
  • 80.11
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
5.35e3
  • 5.35e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
5.50e3
  • 5.50e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
6.45e3
  • 6.45e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.87e3
  • 6.87e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.77e3
  • 8.77e3
61.98
  • 61.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLJQ254085
EnsemblENSECAG00000022072 (DRB)
Uniprot/SPTREMBLF7BCC3, F7BCC3_HORSE

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