E. caballus Gene: HOXD3 - ENSECAG00000022129 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022129
NameHOXD3
Descriptionhomeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
OrganismEquus caballus (horse)
Synonym(s)hox1d, hox4, hox4a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.97e3
  • 7.97e3
65.44
  • 65.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.24
  • 54.24
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.30e4
44.31
  • 44.31
  • 43.51
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.30e4
43.97
  • 43.97
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
43.96
  • 43.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.32
  • 38.32
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.57
  • 36.57
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.34
  • 36.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
  • 1.66e4
31.04
  • 31.04
  • 27.93
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022129 (HOXD3)
HGNCHGNC:5137 (HOXD3)
Uniprot/SPTREMBLF6XKG4, F6XKG4_HORSE

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