E. caballus Gene: GCA - ENSECAG00000022290 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022290
NameGCA
Descriptiongrancalcin [Source:HGNC Symbol;Acc:HGNC:15990]
OrganismEquus caballus (horse)
Synonym(s)gcl

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
667
  • 667
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.21e3
  • 1.21e3
94.74
  • 94.74
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.31e3
  • 1.31e3
  • 1.86e3
94.31
  • 94.31
  • 91.92
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.71e3
  • 1.71e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.82e3
  • 1.82e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.67e3
  • 2.67e3
88.41
  • 88.41
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.69e3
  • 2.69e3
88.35
  • 88.35
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.75e3
  • 2.75e3
  • 3.37e3
88.08
  • 88.08
  • 85.37
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.29e3
  • 4.29e3
  • 5.14e3
  • 7.51e3
  • 1.05e4
81.38
  • 81.38
  • 77.69
  • 67.43
  • 54.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.99e3
  • 5.99e3
74.03
  • 74.03
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
73.72
  • 73.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.36e3
  • 6.36e3
  • 8.70e3
72.40
  • 72.40
  • 62.27
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.65e3
  • 7.65e3
  • 8.03e3
66.84
  • 66.84
  • 65.16
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
64.09
  • 64.09
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.34e3
  • 8.34e3
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
8.35e3
  • 8.35e3
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.39e3
  • 8.39e3
  • 9.36e3
63.63
  • 63.63
  • 59.40
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.81e3
  • 8.81e3
61.80
  • 61.80
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.38e3
  • 9.38e3
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.86e3
  • 9.86e3
57.26
  • 57.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.04
  • 53.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022290 (GCA)
HGNCHGNC:15990 (GCA)
Uniprot/SPTREMBLF7BK61, F7BK61_HORSE

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