E. caballus Gene: TRPV6 - ENSECAG00000022404 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022404
NameTRPV6
Descriptiontransient receptor potential cation channel, subfamily V, member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
OrganismEquus caballus (horse)
Synonym(s)cat1, ecac2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.18e3
  • 4.18e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.45e3
  • 4.45e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.63e3
  • 5.63e3
75.60
  • 75.60
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
7.92e3
  • 7.92e3
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
  • 1.06e4
  • 1.23e4
  • 1.33e4
56.07
  • 56.07
  • 53.86
  • 46.63
  • 42.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.08
  • 53.08
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
52.05
  • 52.05
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.28
  • 51.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.14e4
  • 1.14e4
  • 1.20e4
50.56
  • 50.56
  • 47.93
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
48.66
  • 48.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.58
  • 44.58
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.32
  • 41.32
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.83
  • 40.83
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
  • 1.78e4
29.45
  • 29.45
  • 22.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022404 (TRPV6)
HGNCHGNC:14006 (TRPV6)
Uniprot/SPTREMBLF6UPE4, F6UPE4_HORSE

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