E. caballus Gene: PSMA6 - ENSECAG00000022437 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022437
NamePSMA6
Descriptionproteasome subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:9535]
OrganismEquus caballus (horse)
Synonym(s)iota, mgc22756, mgc2333, mgc23846, p27k, pros27

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
424
  • 424
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
428
  • 428
  • 456
98.15
  • 98.15
  • 98.03
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
444
  • 444
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
464
  • 464
97.99
  • 97.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
550
  • 550
  • 783
  • 1.01e3
  • 1.14e3
97.62
  • 97.62
  • 96.61
  • 95.62
  • 95.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
605
  • 605
  • 717
97.38
  • 97.38
  • 96.90
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
659
  • 659
  • 956
97.15
  • 97.15
  • 95.86
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
738
  • 738
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
750
  • 750
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
767
  • 767
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
775
  • 775
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
916
  • 916
96.03
  • 96.03
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
954
  • 954
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.01e3
  • 1.01e3
  • 1.01e3
95.64
  • 95.64
  • 95.60
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.22e3
  • 1.22e3
94.70
  • 94.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.36e3
  • 1.36e3
94.09
  • 94.09
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
  • 2.16e3
93.69
  • 93.69
  • 90.63
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.59e3
  • 1.59e3
93.09
  • 93.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.94e3
  • 1.94e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.63e3
  • 2.63e3
88.62
  • 88.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022437 (PSMA6)
HGNCHGNC:9535 (PSMA6)
Uniprot/SPTREMBLF7BRA4, F7BRA4_HORSE

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