E. caballus Gene: PTP4A1 - ENSECAG00000022483 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022483
NamePTP4A1
Descriptionprotein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:HGNC:9634]
OrganismEquus caballus (horse)
Synonym(s)prl-1, ptpcaax1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
205
  • 205
99.12
  • 99.12
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
234
  • 234
98.99
  • 98.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
302
  • 302
  • 397
98.69
  • 98.69
  • 98.28
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
359
  • 359
  • 430
98.45
  • 98.45
  • 98.14
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
389
  • 389
  • 398
  • 521
  • 885
98.32
  • 98.32
  • 98.28
  • 97.75
  • 96.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
477
  • 477
  • 498
97.94
  • 97.94
  • 97.84
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
488
  • 488
97.89
  • 97.89
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
664
  • 664
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
696
  • 696
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
734
  • 734
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
828
  • 828
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
840
  • 840
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.06e3
  • 1.06e3
95.42
  • 95.42
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.06e3
  • 1.06e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.12e3
  • 1.12e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.18e3
  • 1.18e3
  • 1.65e3
94.88
  • 94.88
  • 92.85
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.30e3
  • 1.30e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.60e3
  • 1.60e3
93.05
  • 93.05
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.09e3
  • 2.09e3
  • 3.58e3
90.94
  • 90.94
  • 84.48
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
2.36e3
  • 2.36e3
89.78
  • 89.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLJL616014
EnsemblENSECAG00000022483 (PTP4A1)
HGNCHGNC:9634 (PTP4A1)
Uniprot/SPTREMBLF7B2W4, F7B2W4_HORSE

Do not show this banner again